Klemens Vierlinger

2024

Neurodevelopmental outcome in preterm infants with intraventricular hemorrhages: the potential of quantitative brainstem MRI.

Kienast, P., Schmidbauer, V., Yildirim, M. S., Seeliger, S., Stuempflen, M., Elis, J., Giordano, V., Fuiko, R., Olischar, M., Vierlinger, K., Nöhammer, C., Berger, A., Prayer, D., Kasprian, G. & Goeral, K., 7 May 2024, In: Cerebral Cortex. 34, 5, 9 p., bhae189.

Research output: Contribution to journal › Article › peer-review

Open Access

Predicting Outcomes of Preterm Neonates Post Intraventricular Hemorrhage

Vignolle, G. A., Bauerstätter, P., Schönthaler, S., Nöhammer, C., Olischar, M., Berger, A., Kasprian, G., Langs, G., Vierlinger, K. & Goeral, K., 25 Sept 2024, In: International Journal of Molecular Sciences. 25, 19, 17 p., 10304.

Research output: Contribution to journal › Article › peer-review

Proceedings of the 15th International Newborn Brain Conference: Other forms of brain monitoring, such as NIRS, fMRI, biochemical, etc. Machine learning predicts outcomes in preterm neonates with intraventricular hemorrhage using targeted proteomics

Proceedings of the 15th International Newborn Brain Conference:, Schöntaler, S., Nöhammer, C., Olischar, M., Berger, A., Kasprian, G., Langs, G., Vierlinger, K., Nicoletti, N., Lavu, R., Liu, W., Karnati, S., Puthuraya, S., Turner, H. L., Boardman, J. P., Robertson, N. J., Pradas, A. L., Schwaberger, B., Pichler, G. & El-Dib, M. & 3 others, Goldstein, S., Sunwoo, J. & Schlatterer, S., 5 Aug 2024, In: Journal of Neonatal-Perinatal Medicine. 17, p. S393-S394 2 p., 1.

Research output: Contribution to journal › Article › peer-review

Open Access

2023

Antibody Profiling and In Silico Functional Analysis of Differentially Reactive Antibody Signatures of Glioblastomas and Meningiomas

Milchram, L., Kulovics, R., Sonntagbauer, M., Schönthaler, S., Vierlinger, K., Dorfer, C., Cameron, C., Saydam, O. & Weinhäusel, A., 11 Jan 2023, In: International Journal of Molecular Sciences. 24, 2, 22 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Patients with Systemic Juvenile Idiopathic Arthritis (SJIA) Show Differences in Autoantibody Signatures Based on Disease Activity

Krainer, J., Hendling, M., Siebenhandl, S., Fuehner, S., Kessel, C., g, E., Vierlinger, K., Foell, D., Schönthaler, S. & Weinhäusel, A., 15 Sept 2023, In: Biomolecules. 13, 9

Research output: Contribution to journal › Article › peer-review

Open Access

Targeting epigenetic features in clear cell sarcomas based on patient-derived cell lines

Karner, C., Anders, I., Vejzovic, D., Szkandera, J., Scheipl, S., Deutsch, A. J. A., Weiss, L., Vierlinger, K., Kolb, D., Kühberger, S., Heitzer, E., Habisch, H., Zhang, F., Madl, T., Reininger-Gutmann, B., Liegl-Atzwanger, B. & Rinner, B., 29 Jan 2023, In: Journal of Translational Medicine. 21, 19 p., 54.

Research output: Contribution to journal › Article › peer-review

Open Access

2022

Circulating serum microRNAs including senescent miR-31-5p are associated with incident fragility fractures in older postmenopausal women with type 2 diabetes mellitus

Heilmeier, U., Hackl, M., Schroeder, F., Torabi, S., Kapoor, P., Vierlinger, K., Eiriksdottir, G., Harris, T., Gudnason, V., Link, T., Grillari, J. & Schwartz, A., 2022, In: Bone. 158, 1, p. 116308 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Designed SARS‐CoV‐2 receptor binding domain variants form stable monomers

Klausberger, M., Laurent, E., Stadlbauer, K., Vierlinger, K., Hofner, M., Gerner, W., Grebien, F., Kienzl, N., Stadlmayr, G., Grünwald-Gruber, C., Stracke, F., Manhart, M., Weinhäusel, A., Mach, L. & Wozniak Knopp, G., 2022, In: Biotechnology Journal. 1, 1, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Functional Analysis of Autoantibody Signatures in Rheumatoid Arthritis

Milchram, L., Fischer, A., Sieghart, D., Vierlinger, K., Blüml, S., Huber, J., Soldo, R., Steiner, G. & Weinhäusel, A., 2022, In: Molecules. 27, 4, p. 1452 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

In Planta Production of the Receptor-Binding Domain From SARS-CoV-2 With Human Blood Group A Glycan Structures

König-Beihammer, J., Vavra, U., Shin, Y.-J., Veit, C., Grünwalder-Gruber, C., Gillitschka, Y., Huber, J., Hofner, M., Vierlinger, K., Mitteregger, D., Weinhäusel, A. & Strasser, R., 2022, In: Frontiers in Chemistry. 9, 9, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

2021

A Comprehensive Antigen Production and Characterisation Study for Easy-to-Implement, Specific and Quantitative SARS-CoV-2 Serotests

Klausberger, M., Dürkop, M., Haslacher, H., Wozniak Knopp, G., Puschmann, M., Perkmann, T., Vierlinger, K. & Weinhäusel, A., 2021, In: eBioMedicine. 67, 103348, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Expression Profiling Suggests Loss of Surface Integrity and Failure of Regenerative Repair as Major Driving Forces for COPD Progression

Samaha, E., Vierlinger, K., Weinhappel, W., Godnic-Cvar, J., Nöhammer, C., Koczan, D., Thiesen, H.-J., Yanai, H., Fraifeld, V. & Ziesche, R., 2021, In: American Journal of Respiratory Cell and Molecular Biology. 1, 1, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Impact of Specific N-Glycan Modifications on the Use of Plant-Produced SARS-CoV-2 Antigens in Serological Assays

Schwestka, J., König-Beihammer, J., Vavra, U., Grünwald-Gruber, C., Maresch, O., Klausberger, M., Manhart, M., Huber, J., Hofner, M., Vierlinger, K., Weinhäusel, A., Swoboda, I., Binder, C. J., Gerner, W., Grebien, F., Altmann, F., Mach, L., Stöger, E. & Strasser, R., 2021, In: Frontiers in Plant Science. 1, 1, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

N-Glycosylation of the SARS-CoV-2 Receptor Binding Domain Is Important for Functional Expression in Plants

Shin, Y.-J., König-Beihammer, J., Vavra, U., Schwestka, J., Kienzl, N., Klausberger, M., Laurent, E., Grünwald-Gruber, C., Vierlinger, K., Hofner, M., Weinhäusel, A., Stöger, E., Mach, L. & Strasser, R., 2021, In: Frontiers in Plant Science. 1, 1, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Random rotation for identifying differentially expressed genes with linear models following batch effect correction

Hettegger, P., Vierlinger, K. & Weinhäusel, A., 2021, In: Bioinformatics. 1, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2020

Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

Vierlinger, K., 2020, In: BMC Genomics. 21, p. 290 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2019

EPIC-TABSAT: analysis tool for targeted bisulfite sequencing experiments and array-based methylation studies

Krainer, J., Weinhäusel, A., Hanak, K., Pulverer, W., Özen, S., Vierlinger, K. & Pabinger, S., 2019, In: Nucleic Acids Research. 1, 4, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2017

Ape1 guides DNA repair pathway choice that is associated with drug tolerance in glioblastoma.

Ströbel, T., Madlener, S., Tuna, S., Vose, S., Langerwerij, T., Wurdinger, T., Vierlinger, K., Wöhrer, A., Price, B., Demple, B., Saydam, O. & Saydam, N., 2017, In: Scientific Reports. 7, 1, p. 9674 1 p.

Research output: Contribution to journal › Article › peer-review

Middle age enhances expression of innate immunity genes in a female mouse model of pulmonary fibrosis.

Golec, M., Wielscher, M., Lemieszek, M., Vierlinger, K., Skórska, C., Hütter, S., Sitkowska, J., Mackiewicz, B., Góra-Florek, A., Ziesche, R., Yanai, H., Fraifeld, V., Milanowski, J. & Dutkiewicz, J., 2017, In: Biogerontology. 18, 2, p. 253-262 10 p.

Research output: Contribution to journal › Article › peer-review

New liver cancer biomarkers: PI3K/AKT/mTOR pathway members and eukaryotic translation initiation factors

Golob-Schwarzl, N., Krassnig, S., Töglhofer, A., Park, Y., Gogg-Kamerer, M., Vierlinger, K., Schröder, F., Rhee, H., Schicho, R., Fickert, P. & Haybaeck, J., 2017, In: European Journal of Cancer. 83, 9, p. 56-70 15 p.

Research output: Contribution to journal › Article › peer-review

2016

Analysis and Visualization Tool for Targeted Amplicon Bisulfite Sequencing on Ion Torrent Sequencers

Pabinger, S., Ernst, K., Pulverer, W., Kallmeyer, R., Ana, M., Metrustry, S., Katic, D., Nuzzo, A., Kriegner, A., Vierlinger, K. & Weinhäusel, A., 2016, In: PLoS ONE. 1, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

Multiplex characterization of human pathogens including species and antibiotic-resistance gene identification

Barišić, I., Petzka, J., Schoenthaler, S., Vierlinger, K., Noehammer, C. & Wiesinger-Mayr, H., 1 Jan 2016, In: Journal of Medical Microbiology.

Research output: Contribution to journal › Article › peer-review

Serum miRNA Signatures Are Indicative of Skeletal Fractures in Postmenopausal Women With and Without Type 2 Diabetes and Influence Osteogenic and Adipogenic Differentiation of Adipose Tissue-Derived Mesenchymal Stem Cells In Vitro.

Heilmeier, U., Hackl, H., Skalicky, S., Weilner, S., Schroeder, F., Vierlinger, K., Patsch, J., Baum, T., Oberbauer, E., Lobach, I., Burghardt, H., Schwartz, A., Grillari, J. & Link, T. I., 2016, In: Bone. p. 2173-2192 20 p.

Research output: Contribution to journal › Article › peer-review

The prostate cancer immunome: In silico functional analysis of antigenic proteins from microarray profiling with IgG

Luna-Coronell, J. A., Vierlinger, K., Gamperl, M., Hofbauer, J., Berger, I. & Weinhäusel, A., Apr 2016, In: Proteomics. 16, 8, p. 1204-14 11 p.

Research output: Contribution to journal › Article › peer-review

The Prostate Cancer Immunome: In Silico Functional Analysis of Antigenic Proteins from Microarray Profiling with IgG

Luna-Coronell, J., Vierlinger, K., Gamperl, M., Hofbauer, J., Berger, I. & Weinhäusel, A., 2016, In: Journal of Proteomics. 1, p. 1 1 p.

Research output: Contribution to journal › Article › peer-review

2015

Epigenetic profile of human adventitial progenitor cells correlates with therapeutic outcomes in a mouse model of limb ischemia.

Gubernator, M., Slater, S., Spencer, M., Spiteri, I., Sottoriva, A., Piu, F., Rowlinson, J., Avolio, E., Katare, R., Mangialardi, G., Oikawa, A., Reni, C., Campagnolo, P., Spinetti, G., Touloumis, A., Proandi, F., Pesce, M., Hofner, M., Vierlinger, K. & Emanueli, C. & 2 others, Angelini, G. & Madeddu, P., 2015, In: Arteriosclerosis, Thrombosis, and Vascular Biology. 35, 3, p. 675-688 14 p.

Research output: Contribution to journal › Article › peer-review

Multiplex characterisation of human pathogens including species and antibiotic resistance gene identification

Barisic, I., Petzka, J., Schönthaler, S., Vierlinger, K., Nöhammer, C. & Wiesinger-Mayr, H., 2015, In: Journal of Medical Microbiology.

Research output: Contribution to journal › Article › peer-review

Wound healing and longevity: lessons from long-lived aMUPA mice

Yanai, H., Toren, D., Vierlinger, K., Hofner, M., Nöhammer, C., Chilosi, M., Budovsky, A. & Fraifeld, V., 2015, In: Aging. 7, 3, p. 167-176 10 p.

Research output: Contribution to journal › Article › peer-review

2014

A survey of tools for the analysis of quantitative PCR (qPCR) data

Pabinger, S., Rödiger, S., Kriegner, A., Vierlinger, K. & Weinhäusel, A., 2014, In: Biomolecular Detection and Quantification. 1, 1, p. 23-33 11 p.

Research output: Contribution to journal › Article

Human blood monocytes support persistence, but not replication of the intracellular pathogen C. pneumoniae.

Buchacher, T., Wiesinger-Mayr, H., Vierlinger, K., Rüger, B., Stanek, G., Fischer, M. & Weber, V., 2014, In: BMC Immunology. 15, 60, 1 p.

Research output: Contribution to journal › Article › peer-review

Increased Antioxidant Defense Mechanism in Human Adventitia-Derived Progenitor Cells Is Associated with Therapeutic Benefit in Ischemia

Iacobazzi, D., Mangialardi, G., Hofner, M., Wielscher, M., Vierlinger, K., Reni, C., Oikawa, A., Spinetti, G., Vono, R., Sangalli, E., Montagnani, M. & Madeddu, P., 2014, In: Antioxidants & Redox Signaling. 1 p.

Research output: Contribution to journal › Article › peer-review

Strategies for validation and testing of DNA methylation biomarkers.

Nöhammer, C., Pulverer, W., Hassler, M., Hofner, M., Wielscher, M., Vierlinger, K., Liloglou, T., McCarthy, D., Jensen, T., Nygren, A., Trooskens, G., Gohlke, H., Braspenning, M., Van Criekinge, W., Egger, G. & Weinhäusel, A., 2014, In: Epigenomics. 6, 6, p. 603-622 20 p.

Research output: Contribution to journal › Article › peer-review

2013

Age influence on hypersensitivity pneumonitis induced in mice by exposure to Pantoea agglomerans

Lemieszek, M., Chilosi, M., Golec, M., Skórska, C., Dinnyes, A., Mashayekhi, K., Vierlinger, K., Huaux, F., Wielscher, M., Hofner, M., Yakoub, Y., Pastena, C., Daniele, I., Cholewa, G., Sitkowska, J., Lisowska, W., Zwoliński, J., Milanowski, J., Mackiewicz, B. & Góra-Florek, A. & 2 others, Ziesche, R. & Dutkiewicz, J., 2013, In: Inhalation Toxicology. 25, p. 640-650 11 p.

Research output: Contribution to journal › Article › peer-review

2012

Evaluation of auto-antibody serum biomarkers for breast cancer screening and in silico analysis of sero-reactive proteins.

Syed, P., Vierlinger, K., Kriegner, A., Sergelen, K., Rappaport, C., Nöhammer, C., Singer, C. F., Weinhäusel, A. & Luna-Coronell, J., 2012, In: Journal of Molecular Biochemistry. 1, p. 116-128 13 p.

Research output: Contribution to journal › Article

2011

Identification of SERPINA1 as single marker for papillary thyroid carcinoma

Vierlinger, K., Mansfeld, M., Koperek, O., Nöhammer, C., Kaserer, K. & Leisch, F., 2011, In: BMC Med Genomics. 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2010

Tumour auto-antibody screening: performance of protein microarrays using SEREX derived antigens

Stempfer, R., Syed, P., Vierlinger, K., Pichler, R., Meese, E., Leidinger, P., Ludwig, N., Kriegner, A., Nöhammer, C. & Weinhäusel, A., 2010, In: BMC Cancer. 1 p.

Research output: Contribution to journal › Article › peer-review

2009

Gene expression studies in cultured dendritic cells: new indicators for the discrimination of skin sensitizers and irritants in vitro

Szameit, S., Vierlinger, K., Farmer, L., Tuschl, H. & Nöhammer, C., 2009, In: Clinical and Experimental Allergy. 39, 6, p. 856-868 13 p.

Research output: Contribution to journal › Article › peer-review

RGG: A general GUI Framework for R scripts

Visne, I., Dilaveroglu, E., Vierlinger, K., Lauss, M., Yildiz, A., Weinhäusel, A., Nöhammer, C., Leisch, F. & Kriegner, A., 2009, In: BMC Bioinformatics. 10, 74, 1 p.

Research output: Contribution to journal › Article › peer-review

2008

Aberrant methylation evidence in human cancer

Lauss, M., Visne, I., Weinhäusel, A., Vierlinger, K., Nöhammer, C. & Kriegner, A., 2008, In: MethCancerDB.

Research output: Contribution to journal › Article

MethCancer DB - aberrant DNA methylation in human cancer

Lauss, M., Visne, I., Weinhäusel, A., Vierlinger, K., Nöhammer, C. & Kriegner, A., 2008, In: British Journal of Cancer. 98, 4, p. 816-817 2 p.

Research output: Contribution to journal › Article › peer-review

Microarray-Based In Vitro Test System for a Discrimination of Contact Allergens and Irritants: Identification of Potential Marker Genes

Szameit, S., Vierlinger, K., Farmer, L., Tuschl, H. & Nöhammer, C., 2008, In: Clinical Chemistry. 54, 3, p. 525-533 9 p.

Research output: Contribution to journal › Article › peer-review

The Influence of Gender, Age, and RET Polymorphisms on C-Cell Hyperplasia and Medullary Thyroid Carcinoma

Weinhäusel, A., Scheuba, C., Lauss, M., Kriegner, A., Kaserer, K., Vierlinger, K., Haas Oskar, A. & Niederle, B., 2008, In: Thyroid. 18, 12, p. 1269-1276 8 p.

Research output: Contribution to journal › Article › peer-review

2007

Accurate Identification of human pathogens isolated from blood using microarray hybridisation and signal pattern recognition

Wiesinger-Mayr, H., Vierlinger, K., Pichler, R., Kriegner, A., Hirschl Alexander, M., Presterl, E., Bodrossy, L. & Nöhammer, C., 2007, In: BMC Microbiology. p. 1-51 51 p.

Research output: Contribution to journal › Article › peer-review

Klemens Vierlinger

Research output

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